Faculty & Staff
Snijesh VP
- Overview
- Projects
- Publications
- Other Contributions
Interested in understanding the role of nuclear receptors specifically the cross-talks of Estrogen, Progesterone, Androgen, Glucocorticoid and Vitamin D receptors in breast cancer. The work involves development of a computational algorithm that predicts fraction of nuclear receptors in the breast tumor samples. This study may help in classifying the patients who will respond better to the treatment based on the fraction or proportions of various nuclear receptor expressions and their downstream signatures.
Qualification/ Education
- M.Sc. (2011-2013) - Bioinformatics
Bharathiar University - B.Sc. (2008-2011) - Bioinformatics
Kannur University
Experience
- Bioinformatician
St. John's Research Institute
2019-Present
Bangalore, India - Bioinformatician
Innov4Sight Health and Biomedical Systems Private Limited
2017-2019
Hosur, India - Project Assistant
Karunya Institute of Technology and Sciences (Deemed University)
2016-2017
Coimbatore, India - Project Assistant
Karunya Institute of Technology and Sciences (Deemed University)
2013-2016
Coimbatore, India
Areas of interest
Interested in understanding the cross-talks of nuclear receptor (Estrogen, Progesterone, Androgen, Glucocorticoid and Vitamin D receptors) in breast cancer.
- Bioinformatician
St. John's Research Institute
2019-Present
Bangalore, India - Bioinformatician
Innov4Sight Health and Biomedical Systems Private Limited
2017-2019
Hosur, India - Project Assistant
Karunya Institute of Technology and Sciences (Deemed University)
2016-2017
Coimbatore, India - Project Assistant
Karunya Institute of Technology and Sciences (Deemed University)
2013-2016
Coimbatore, India
Interested in understanding the cross-talks of nuclear receptor (Estrogen, Progesterone, Androgen, Glucocorticoid and Vitamin D receptors) in breast cancer.
No groups and associations specified.
No project details available.
In silico Genotype-Phenotype Correlation Analysis of Inherited Variations in Autism Spectrum Disorder Families Identify an Interplay between Sensory Function and Repetitive-behaviour Genes
Meghana Kommerahalli RameshRaju, Snijesh Valiya Parambath, Durbagula Srividhya, Bhagyalakshmi Shankarappa, Ramachandra Nallur Basappa & Ashitha S.Niranjana Murthy Postpartum breast cancer as a distinct oncologic entity: linking physiological tissue remodelling to tumor biology and clinical translation
Vidya P. Nimbalkar, Snijesh V. P., Akash Dash, Meenakshi Jothikumar, Anjaney J. Pandey, P. S. Hari, Aruna Korlimarla, Sabarinathan Radhakrishanan & Jyothi S. Prabhu Palmitic acid-induced endoplasmic reticulum stress links metabolic stress to senescence and regulates cell fate via PERK signalling in colon cancer cells.
Soumya, Valappan Veetil; Parambath, Snijesh Valiya; Binoy, Chevookaren Francis; Raghavamenon, Achuthan C.; Kadunganattil, Suraj; Babu, Thekkekara Devassy Best Practices for Variant Calling Using the Genome Analysis Toolkit
V. P. Snijesh, K Shivakumar, K. M. Punya, Ashitha S. Niranjana Murthy Temporal metabolomic fingerprinting identifies adenine as a novel biomarker for early detection of Escherichia coli infection in broiler chickens
Asha Ranaraja, Iresha Subhasinghe, Shaik Noor Ahmad, Babajan Banaganapalli, Shelly Popowich, Snijesh V Parambath, Lisanework E Ayalew, Rupasri Mandal, David S Wishart, Suresh Tikoo, Susantha Gomis The mTORC2 subunit RICTOR drives breast cancer progression by promoting ganglioside biosynthesis through transcriptional and epigenetic mechanisms
Mohammad Nafees Ansari ,Somesh K. Jha ,Ali Khan ,Kajal Rajput,Nishant Pandey,Dolly Jain,Rajeshwari Tripathi,Nihal Medatwal,Pankaj Sharma,Sudeshna Datta,Animesh Kar,Trishna Pani,Sk Asif Ali,Kaushavi Cholke,Kajal Rana,Valiya P. Snijesh,Geetashree Mukherjee,Suryanarayana V. S. Deo,Soumen Basak,Ashutosh Mishra,Jyothi S. Prabhu,Arnab Mukhopadhyay,Avinash Bajaj ,Ujjaini Dasgupta Repurposing statins in combination therapy for effective ablation of metastatic breast cancer
Rifat Aara, Neeha Sinai Borker, Jyothilakshmi Sajimon, Seemadri Subhadarshini , Snijesh VP, Vidya P. Nimbalkar, Manju Moorthy, Archana P. Thankamony, Athul Krishnan R , Mohit Kumar Jolly, Jyothi S. Prabhu, Radhika Nair Spatial profiling reveals unique immune microenvironment in premenopausal triple-negative breast cancer associated with therapy response
Nimbalkar VP, Snijesh VP, Rajarajan S, Anupama CE, Mahalakshmi S, Alexander A, Dechamma D, Moorthy M, Ramaswamy G, Ramesh R, Srinath BS, Prabhu JS. ALDH1A1 as a marker for metastasis initiating cells: A mechanistic insight
Nandini Datta, VP Snijesh, K Parvathy, AS Sneha, Tessy Thomas Maliekal SHH signaling as a key player in endometrial cancer: unveiling the correlation with good prognosis, low proliferation, and anti-tumor immune milieu
VP Snijesh, Shivakumar Krishnamurthy, Vipul Bhardwaj, KM Punya, Ashitha S Niranjana Murthy, Mahmoud Almutadares, Wisam Tahir Habhab, Khalidah Khalid Nasser, Babajan Banaganapalli, Noor Ahmad Shaik, Walaa F Albaqami T53. TEMPORAL DYNAMICS AND MOLECULAR MECHANISMS OF AUTISM RISK GENES IDENTIFIED IN THE INDIAN POPULATION: PRENATAL AND POSTNATAL INSIGHTS
Durbagula Srividhya, VP Snijesh, SNM Ashitha, Aruna Korlimarla, Naveen Kumar Gowda Whole exome sequencing of a multiplex family of indian origin identifies variants in the RAI1 and FLII genes within the 17p11. 2 region in siblings with autism and Smith Magenis syndrome
Durbagula Srividhya, Snijesh Valiya Parambath, Ranganayaki Sathyanarayanan, Aparna Huligerepura Sosalegowda, Aruna Korlimarla, Ashitha S Niranjana Murthy, Nishant Prabhakaran, Meghana Vijayanand, Naveen Kumar Chandappa Gowda Differential role of glucocorticoid receptor based on its cell type specific expression on tumor cells and infiltrating lymphocytes
Snijesh VP, Nimbalkar VP, Patil S, Rajarajan S, Anupama CE, Mahalakshmi S, Alexander A, Soundharya R, Ramesh R, Srinath BS, Jolly MK, Prabhu JS Elucidating the Role of MicroRNA-18a in Propelling a Hybrid Epithelial–Mesenchymal Phenotype and Driving Malignant Progression in ER-Negative Breast Cancer – Cells
Madhumathy G. Nair 1, Apoorva D. Mavatkar 1, Chandrakala M. Naidu 1, Snijesh V. P, Anupama C. E. , Savitha Rajarajan , Sarthak Sahoo , Gayathri Mohan , Vishnu Sunil Jaikumar , Rakesh S. Ramesh , Srinath B. S. , Mohit Kumar Jolly , Tessy Thomas Maliekal and Jyothi S. Prabhu A comparative analysis of clinicopathological features and survival between pre and postmenopausal breast cancer from an Indian cohort.
Nimbalkar VP, Rajarajan S, V P S, Alexander A, Kaluve R, Selvam S, Ramesh R, B S S, Prabhu JS. Premenopausal women with breast cancer in the early post-partum period show molecular profiles of invasion and are associated with poor prognosis.
Nimbalkar VP, Snijesh VP, Rajarajan S, Alexander A, Kaluve R, Ramesh R, Srinath BS, Prabhu JS. Estimation of ALU Repetitive Elements in Plasma as a Cost-Effective Liquid Biopsy Tool for Disease Prognosis in Breast Cancer
Nair MG, Ramesh RS, Naidu CM, Mavatkar AD, V P S, Ramamurthy V, Somashekaraiah VM, C E A, Raghunathan K, Panigrahi A, Das M, Dhar SK, Prabhu JS An androgen receptor regulated gene score is associated with epithelial to mesenchymal transition features in triple negative breast cancers
Rajarajan S, Snijesh VP, Anupama CE, Nair MG, Mavatkar AD, Naidu CM, Patil S, Nimbalkar VP, Alexander A, Pillai M, Jolly MK, Sabarinathan R, Ramesh RS, Bs S, Prabhu JS Detection of differentially expressed circulating micro-RNA among Indians with Type 2 Diabetes using a global expression profile and systematic analysis
Sucharita Sambashivaiah, Ashwini Priyanka, Vidya Nimbalkar2, Snijesh V.P., Jyothi Prabhu Integrative system biology and mathematical modeling of genetic networks identifies shared biomarkers for obesity and diabetes
Abdulhadi Ibrahim H Bima, Ayman Zaky Elsamanoudy, Walaa F Albaqami, Zeenath Khan, Snijesh Valiya Parambath, Nuha Al-Rayes, Prabhakar Rao Kaipa, Ramu Elango, Babajan Banaganapalli, Noor A Shaik Transcriptome-based molecular networks uncovered interplay between druggable genes of CD8+ T cells and changes in immune cell landscape in patients with pulmonary tuberculosis
Faten Ahmad Alsulaimany, Nidal M Omer Zabermawi, Haifa Almukadi, Snijesh V Parambath, Preetha Jayasheela Shetty, Venkatesh Vaidyanathan, Ramu Elango, Babajan Babanaganapalli, Noor Ahmad Shaik Machine learning for endometrial cancer prediction and prognostication
Vipul Bhardwaj, Arundhiti Sharma, Snijesh Valiya Parambath, Ijaz Gul, Xi Zhang, Peter E Lobie, Peiwu Qin, Vijay Pandey Prenatal epigenetic factors are predisposing for neurodevelopmental disorders—Considering placenta as a model
Srividhya Durbagula, Aruna Korlimarla, Gayatri Ravikumar, Snijesh Valiya Parambath, Sowmyashree Mayur Kaku, Ashok Mysore Visweswariah Comprehensive characterization of immune landscape of Indian and Western triple negative breast cancers
Korlimarla A, Ps H, Prabhu J, Ragulan C, Patil Y, Vp S, Desai K, Mathews A, Appachu S, Diwakar RB, Bs S, Melcher A, Cheang M, Sadanandam A miR-18a Mediates Immune Evasion in ER-Positive Breast Cancer through Wnt Signaling
Nair MG, D A, M C, Vp S, Patil S, Ce A, Mukherjee G, Kumar RV, Prabhu JS, Ts S Exovesicular-Shh confers Imatinib resistance by upregulating Bcl2 expression in chronic myeloid leukemia with variant chromosomes
Anusha, Hamza Dalal, Sitalakshmi Subramanian, Snijesh VP, Divya A Gowda, Sharat Damodar, Neha Vyas Other biological databases
Divya Mishra, Vivek Kumar Chaturvedi, V. P. Snijesh, Noor Ahmad Shaik, and M. P. Singh Construction of Parkinson's disease marker-based weighted protein-protein interaction network for prioritization of co-expressed genes
Gincy George, Snijesh Valiya Parambath, Sowmya Bekshe Lokappa, Jobin Varkey An insight into anti-arthritic property OF C25H34O7 for Rheumatoid arthritis using molecular modelling and molecular dynamics approach
SachidanandSingh Arulmozhi S, Monica Steffi Matchado, V.P.Snijesh, AtulKumar Classifying Rheumatoid Arthritis gene network signatures for identifying key regulatory molecules and their altered pathways by adopting network biology approach
VP Snijesh, Monica Steffi Matchado, Sachidanand Singh Sequence Databases
Vivek Kumar Chaturvedi, Divya Mishra, Aprajita Tiwari, V. P. Snijesh, Noor Ahmad Shaik, and M. P. Singh Breast Cancer Detection: Current Methods and Roadmap to Personalized Medicine
VP Snijesh, Manoj R Kumar Implying analytic measures for unravelling rheumatoid arthritis significant proteins through drug–target interaction
Sachidanand Singh, J Jannet Vennila, VP Snijesh, Gincy George, Chinnu Sunny Network Based Approach for Understanding the Chondrocyte Biology for Rheumatoid Arthritis
S Snijesh, V. P., & Singh Molecular Modeling and Network Based Approach in Explaining the Medicinal Properties of Nyctanthes arbortristis, Lippia nodiflora for Rheumatoid Arthritis
VP Snijesh, Sachidanand Singh Rheumatoid arthritis candidate genes identification by investigating core and periphery interaction structures
Sachidanand Singh, V.P. Snijesh and J. Jannet Vennila No Others Contributions details available.